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Cottrell Selected Publications

Recent Work
 
Cottrell, M.T., and Kirchman, D.L.  2009.  Photoheterotrophic microbes in the Arctic Ocean in summer and winter.  Appl. Environ. Microbiol. 75:4958-4966.


Lami, R., M.T. Cottrell, B.J. Campbell, and D.L. Kirchman.  2009.  Light- dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters. Environ. Microbiol. Environ. Microbiol. 11: 3201-3209.

Kirchman, D.L., Cottrell, M.T., and C. Lovejoy. 2010. The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes. Environ. Microbiol. 12:1132-1143. doi:10.1111/j.1462-2920.2010.02154.x

Lehours, A.C., M.T. Cottrell, O. Dahan, D.L. Kirchman, and C. Jeanthon. 2010. Summer distribution and diversity of aerobic anoxygenic phototrophic bacteria in the Mediterranean Sea in relation to environmental variables.   FEMS Microbiol. Ecol. 74:397-409.

Cottrell, M.T., J. Ras, and D.L. Kirchman. 2010. Bacteriochlorophyll and community structure of aerobic anoxygenic phototrophic bacteria in a particle-rich estuary.   ISME J. 4:945-954.

Christman, G.D., M.T. Cottrell, B.N. Popp, and D.L. Kirchman. 2011. Abundance, diversity, and activity of ammonia-oxidizing prokaryotes in the coastal Arctic Ocean in summer and winter. Appl. Environ. Microb. 77:2026-2034.

Cottrell, M.T., and D.L. Kirchman. 2012. Virus genes in Arctic marine bacteria identified by metagenomic analysis.  Aquat. Microb. Ecol. 66:107-116.

 
Highly cited (Web of Science)
 
Cottrell, M.T. and D.L. Kirchman. 2000. Natural assemblages of marine proteobacteria and members of Cytophaga-Flavobacter cluster consuming low- and high-molecular weight dissolved organic matter. Appl. Environ. Microb. 66:1692-1697.
 
Cottrell, M.T. and D.L. Kirchman. 2000. Community composition of marine bacterioplankton determined by 16S rDNA gene clone libraries and fluorescence in situ hybridization. Appl. Environ. Microbiol. 66:5116-5122.
 
Cottrell, M.T. and D.L. Kirchman. 2003. Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary. Limnol. Oceanogr. 48:168-178.
 
Cottrell, M.T., J.A. Moore, and D.L. Kirchman. 1999. Chitinases from uncultured marine microorganisms. Appl. Envir. Microbiol. 65:2553-2557.
 
Cottrell, M. T., and C. A. Suttle. 1991. Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter, Micromonas pusilla. Mar. Ecol. Prog. Ser. 78:1-9.
 
 
Doctoral work (1989-1995)
 
Cottrell, M. T., and C. A. Suttle. 1991. Wide-spread occurrence and clonal variation in viruses which cause lysis of a cosmopolitan, eukaryotic marine phytoplankter, Micromonas pusilla. Mar. Ecol. Prog. Ser. 78:1-9.
 

Cottrell, M. T., and C. A. Suttle. 1993. Production of axenic cultures of Micromonas pusilla (Prasinophyceae) using antibiotics. J. Phycol. 29:385-387.

Cottrell, M. T., and C. A. Suttle. 1995. Genetic diversity of algal viruses which lyse the photosynthetic picoflagellate Micromonas pusilla (Prasinophyceae). Appl. Environ. Microbiol. 61:3088-3091.

Cottrell, M. T., and C. A. Suttle. 1995. Dynamics of a lytic virus infecting the photosynthetic marine picoflagellate Micromonas pusilla. Limnol. Oceanogr. 40:730-739.

 
Postdoctoral work (1996-2000)
 
Cary, S. C., M. T. Cottrell, J. L. Stein, F. Camacho, and D. Desbruyères. 1997. Molecular identification and localization of filamentous symbiotic bacteria associated with the hydrothermal vent annelid Alvinella pompejana. Appl. Environ. Microbiol. 63:1124-1130.
 

Cottrell, M. T., and S. C. Cary. 1999. Diversity of dissimilatory bisulfite reductase genes of bacteria associated with the deep-sea hydrothermal vent polychaete annelid Alvinella pompejana. Appl. Environ. Microbiol. 65:1127-1132.

Cottrell, M.T., J.A. Moore, and D.L. Kirchman. 1999. Chitinases from uncultured marine microorganisms. Appl. Envir. Microbiol. 65:2553-2557.

Cottrell, M.T. and D.L. Kirchman. 2000. Natural assemblages of marine proteobacteria and members of Cytophaga-Flavobacter cluster consuming low- and high-molecular weight dissolved organic matter. Appl. Environ. Microb. 66:1692-1697.

Cottrell, M.T., D.N. Wood, L.Y. Yu, and D.L. Kirchman. 2000. Selected chitinase genes in cultured and uncultured marine bacteria in the α- and γ-subclasses of the proteobacteria. Appl. Environ. Microbiol. 66:1195-1201.

Cottrell, M.T. and D.L. Kirchman. 2000. Community composition of marine bacterioplankton determined by 16S rDNA gene clone libraries and fluorescence in situ hybridization. Appl. Environ. Microbiol. 66:5116-5122.

 

 

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