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Oliver Publications

Matthew J. Oliver Publications accepted or in press.

Students are noted by **.

Schofield, O., Moline, M. A., Cahill, B., Frazer, T., Kahl, A., Oliver, M., Reinfelder, J., Glenn, S., Chant, R. 2013. Phytoplankton Productivity in a Turbid Buoyant Coastal Plume. Continental Shelf Research. doi:10.1016/j.csr.2013.02.005

Oliver, M. J., Irwin, A. J., Moline, M. A., Fraser, W., Patterson, D., Schofield, O., Kohut, J. 2013. Adélie Penguin Foraging Location Predicted by Tidal Regime Switching. PLOS ONE, 10.1371/journal.pone.0055163.  

Oliver, M. J., **Breece, M. W., Fox, D. A., **Haulsee, D., Kohut, J. T., Manderson, J., Savoy, T. 2013. Shrinking the Haystack: Using an AUV in an Integrated Ocean Observatory to Map Atlantic sturgeon in the Coastal Ocean. Fisheries, 10.1080/03632415.2013.782861.

**Cimino, M. A., Fraser, W. R., Irwin, A. J., Oliver, M. J. 2013. Satellite data identify decadal trends in the quality of Pygocelis penguin chick-rearing habitat, Global Change Biology, DOI: 10.1111/gcb.12016.

Oliver, M. J., Moline, M. A., Robbins, I., Fraser, W., Patterson, D., Schofield, O. 2012. Letting penguins lead: Dynamic modeling of penguin locations guide autonomous robotic sampling, Oceanography, 25(3):120–121, http://dx.doi.org/10.5670/oceanog.2012.84.

Shulman, I., Penta, B, Moline, M., Haddock S., Anderson, S., Oliver, M., Sakalaukus, P. 2012. Can vertical migrations of dinoflagellates explain observed bioluminescence patterns during an upwelling event in Monterey Bay, CA? Journal of Geophysical Research, doi:10.1029/2011JC007480.

Palamara, L., Manderson, J., Kohut, J., Oliver, M. J., Gray, S., Goff, J. 2012. Improving habitat models by incorporating pelagic measurements from coastal ocean observatories, Marine Ecology Progress Series, doi: 10.3354/meps09496.

Manderson, J., Palamara, L., Kohut, J. Oliver, M. J. 2011. Ocean observatory data are useful for regional habitat modeling of species with different vertical habitat preferences, Marine Ecology Progress Series, Vol 438, 1-17, doi:10.3354/meps09308.

Schofield, O., Glenn, S. M., Moline, M. A., Oliver, M., Irwin, A., Chao, Y., Arrot., M. 2011. Ocean Observatories and information: Building a global ocean observing network. In: Encyclopedia of Sustainability Science and Technology, Springer, In Press.

**Geiger, E. F., **Grossi, M. D., Trembanis, A. C., Kohut, J. T., Oliver, M. J. 2011. Satellite-Derived Coastal Ocean and Estuarine Salinity in the Mid-Atlantic, Continental Shelf Research, doi:10.1016/j.csr.2011.12.001

Shulman, I., Moline, M. A., Penta, B., Anderson, S., Oliver, M., Haddock S. H. D. 2011. Observed and modeled bio-optical, bioluminescent and physical properties during a coastal upwelling event in Monterey Bay, CA. Journal of Geophysical Research, doi:10.1029/2010JC006525.

Schofield, O., Kohut, J. Glenn, G., Morell, J., Capella, J., Corredor, J., Orcutt, J. Arrott, M., Krueger, I., Meisinger, M., Peach, C., Vernon, F., Chave, A., Chao, Y., Chien, S., Thompson, D., Brown, W., Oliver, M., Boicourt, W. 2010. A regional Slocum Glider Network in the Mid-Atlantic Bight leverages broad community engagement. Marine Technology Society Journal, doi: 10.4031/MTSJ.44.6.20.

Oliver, M. J., Schofield, O., Bidle, K., 2010. Density dependent expression of a diatom retrotransposon. Marine Genomics, doi: DOI: 10.1016/j.margen.2010.08.006.

Schofield, O., Glenn, S., Orcutt, J., Arrott, M., Messinger, M., Gangopadhyay, A., Brown, W., Signell, R., Moline, M., Chao, Y., Chien, S., Thompson, D., Balasuriya, A., Lermusaiux, P., Oliver, M., 2010. Automated sensor networks to advance ocean science. EOS, 91(39). 

Gómez-Pereira, P. R., Fuchs, B. M., Alonso, C., Oliver, M. J., Beusekom, J. E. E., Amann, R., 2010. Distinct flavobacterial commuities in contrasting water masses of the North Atlantic Ocean. The ISME Journal, doi:10.1038/ismej.2009.142

Irwin, A. J., Oliver, M. J., 2009. Are ocean deserts getting larger? Geophysical Research Letters, Vol. 36, L18706, doi:10.1029/2009GL039414

Oliver, M. J., Irwin, A. J. 2008. Objective Global Ocean Biogeographic Provinces. Geophysical Research Letters, Vol. 35, L15601, doi:10.1029/2008GL034238.

Connolly, J., Knight, C., Oliver, M., Tomanek, L., Beaulieu, J., Moline, M. 2008. Correlated Evolution of Cell Volume and Genome Size in Diatoms (Bacillariophyceae). Journal of Phycology, 44, 124-131.

Falkowski, P. G., Oliver, M. J. 2008. Correspondence: Diatoms in a future ocean – stirring it up: reply from Falkowski and Oliver. Nature Reviews Microbiology doi:10.1038/nrmicro1751-c2.

Falkowski, P. G., Oliver, M. J. 2007. Mix and Match: How Climate Selects Phytoplankton. Nature Reviews Microbiology 5:813-819.

Moline, M. A., Oliver, M. J., Mobley, C. D., Sundman, L., Bensky, T., Bergmann, T., Bissett, W. P., Case, J., Raymond, E. H., Schofield, O. M. E. 2007. Bioluminescence in a Complex Coastal Environment I:  Temporal Dynamics of Night-time Water-leaving Radiance. Journal of Geophysical Research. 112, C11016, doi:10.1029/2007JC004138

Oliver, M. J.,Moline, M. A., Mobley, C. D., Sundman, Schofield, O. M. E. 2007. Bioluminescence in a Complex Coastal Environment II: Prediction of Bioluminescent Source Depth from Spectral Water Leaving Radiance. Journal of Geophysical Research. 112, C11017, doi:10.1029/2007JC004136

Oliver, M. J., Petrov, D., Ackerly, D, Schofield, O. M. Falkowski, P.G. 2007. The Mode and Tempo of Genome Size Evolution in Eukaryotes. Genome Research 10.1101/gr.6096207

Schofield, O., Kerfoot, J., Mahoney, K., Moline, M., Oliver, M., Lohrenz, S., Kirkpatrick, G. Vertical Migration of the Toxic dinoflagellate Karenia brevis and its Impact on Ocean Optics. 2006. Journal of Geophysical Research. 111, C06009, doi:10.1029/2005JC003115.

Schofield, O., Bosch, J., Glenn, S. M., Kirkpatrick, G., Kerfoot, J., Lohrenz, S., Moline, M., Oliver, M., Bissett, P. Bio-optics in integrated ocean observing networks: potential for studying harmful algal blooms. In Real Time Coastal Observing systems for ecosystems dynamics and harmful algal blooms.  Babin, M. And Cullen, J. J. (Eds) UNESCO, Paris. 85-108.

Glenn,S., Arnone, R., Bergmann, T., Bissett, W. P., Crowley, M., Cullen, J., Gryzmski, J., Haidvogel, D., Kohut, J., Moline, M., Oliver, M., Orrico, C., Sherrell, R., Song, S., Weidemann, A., Chant, R., Schofield, O. 2004. Biogeochemical Impact of Summertime Upwelling on the New Jersey Shelf.   Journal of Geophysical Research 109, C12S02, doi:10.1029/2003JC002265.

Schofield, O., Bergmann, T., Oliver, M. J., Irwin, A., Kirkpatrick, G., Bissett, W. P. Moline, M. A., Orrico, C. 2004. Inversion of Spectral Absorption in the Optically Complex Coastal Waters of the Mid-Atlantic Bight. Journal of Geophysical Research 109, C12S04, doi:10.1029/2003JC002071.

Glenn, S., Schofield, O., Dickey, T., Chant, R. Kohut, J., Barrier, H., Bosch, J., Bowers, L., Creed, E., Haldeman, C., Hunter, E., Kerfoot, J., Mudgal, C., Oliver, M. , Roarty, H., Romana, E., Crowley, M., Barrick D., and Jones C. 2004. The expanding role of ocean color and optics in the changing field of operational oceanography. Oceanography 17(2): 86-95.

Schofield, O., Arnone, R., Bissett, W. P., Dickey, T., Davis, Curt, Finkel, Z., Oliver, M. J., Moline, M. A. 2004. Watercolors in the coastal zone: What can we see? Oceanography 17(2): 30-37.

Moline, M. A., Blackwell, S., Chant, R., Oliver, M. J., Bergmann, T., Glenn, S., Schofield, O. Episodic physical forcing and the structure of phytoplankton communities in the coastal waters of New Jersey. 2004. Journal of Geophysical Research 110, C12S05, doi:10.1029/2003JC001985.

Oliver, M. J.,Schofield, O., Bergmann, T., Glenn, S. M., ,Orrico, C., Moline, M. A. Deriving In Situ Phytoplankton Absorption for Bio-optical Productivity Models in Turbid Waters.  2004. Journal of Geophysical Research 109, C07S11, doi:10.1029/2002JC001627.

Oliver, M. J.,Glenn, S. M., Kohut, J. T., Irwin, A. J., Schofield, O., Moline, M. A., Bissett, W. P. Bioinformatic Approaches for Objective Detection of Water Masses on Continental Shelves. 2004. Journal of Geophysical Research 109, C07S04, doi:10.1029/2003JC002072.

Moline, M.A., Arnone, R., Bergmann, T., Glenn, S., Oliver, M. J., Orrico, C., Schofield, O., Tozzi, S. 2004. Variability in spectral backscatter estimated from satellites and its relation to in situ measurements in optically complex coastal waters. Journal of International Remote Sensing. 24: 1-4.

Kirkpatrick, G. J., Orrico, C., Moline, M. A., Oliver, M. J., Schofield, O. 2003. Continuous hyperspectral absorption measurements of colored dissolved organic material in aquatic systems. Applied Optics 42(33): 6564-6568.

 

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